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Clinical molecular science / Systems / Creative software

Assay & scientific compute tools

ACTIVEWEB / PUBLIC TESTING

AssayIndex

Laboratory test catalog with source provenance kept visible.

Search, comparison and browser exports retain source links and explicit missing-field labels.

Orderable tests stay separate from supporting references. Absent source values remain null; core browsing runs without a backend.

LOCALMOLECULAR RESEARCH

ExoCortexMBridge

Molecular prediction workbench that keeps structures linked to their inputs.

A persistent queue connects AlphaFold 3 and Boltz-2 jobs to structure review and saved analysis.

Inputs, engine records and recovery state stay with each job. Execution checks and model geometry do not establish biological validity or binding affinity.

Creative software & games

ACTIVEBROWSER / ALPHA

Heroes of the Host

Browser action roguelite built around immune-cell combat.

Infection waves, cooldown abilities and local saves drive each run through a static browser build.

Phaser and TypeScript stage the combat. DOM controls sit over the canvas; combat readability and browser scaling constrain the interface.

PROTOTYPEANDROID / PRIVATE BETA

ExoAVT

Android video instrument for timed, audio-reactive composition.

Imported footage, editable effect timing and producer tags feed MP4 export.

Audio routes and clip points control effects. Saved projects retain the edit; preview and export use the effect chain. APK access is gated for testing.

PROTOTYPEANDROID / TEST BUILD

Operon Splicer

Four-lane Android instrument that plays without external MIDI hardware.

Chord-aware patterns, mutation and locks drive internal synthesis, optional MIDI and WAV stem export.

Bass, Hook, Harmony and Texture run as separate lanes. Recombine changes material while locks preserve selected parts; saved variants retain an instrument state.

PROTOTYPEANDROID / DEBUG BUILD

Recombisplice

Android audio workstation with on-device separation and mastering.

CPU processing splits vocals, drums, bass and other sounds; mix controls feed WAV and stem-archive exports.

Waveform and spectrum views accompany editable tempo, key and annotations. Local processing needs no upload; sound identification requires a paired PC service. CPU separation can take considerable time.

Music / Recombinase

Music written and produced as Recombinase.

Publications

Extraction-free SARS-CoV-2 testing across nasal swab and saliva workflows.

Co-author; extraction-free testing and workflow implementation.

  • 2024 / Journal articleExtraction-Free Testing for SARS-CoV-2 in Nasal Swab and Saliva Samples on a Single High-Throughput Platform
  • 2022 / PreprintCOVIDFast: A high-throughput and RNA extraction-free method for SARS-CoV-2 detection in swab or saliva

Molecular pathology studies of ESR1-NCOA2 fusions and IBD-associated colorectal cancer mutations.

Co-author; molecular pathology and genomics laboratory contributor.

  • 2020 / Journal articleUTROSCT with extensive rhabdoid differentiation, malignant behavior, and ESR1-NCOA2 fusions
  • 2019 / Journal articleTargeted mutational analysis of inflammatory bowel disease-associated colorectal cancers

Clinical NGS data management from laboratory workflow through case handling and reporting.

Co-author; molecular pathology laboratory contributor.

  • 2018 / Journal articleSystem for Informatics in the Molecular Pathology Laboratory: An Open-Source End-to-End Solution for Next-Generation Sequencing Clinical Data Management

Secondary / older tools

LOCALWINDOWS / SUPERVISED

Local Computer Use Agent

Windows automation with review gates when screen state becomes uncertain.

OCR, action logs and recovery steps keep desktop control under supervision.

The operator can inspect actions and intervene. Model routing depends on configuration; local desktop execution does not imply every model request stays local.

PROTOTYPEBROWSER / DETERMINISTIC

NGS Assay Planner

Sequencing strategy planner with explicit assay constraints.

Deterministic rules compare target scope, sensitivity, workflow, cost, risk and validation burden.

The browser exposes assumptions and tradeoffs. Its output is a planning aid; it does not validate a clinical assay.